STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM213BProstamide/prostaglandin F synthase. (205 aa)    
Predicted Functional Partners:
Cbr1
Carbonyl reductase [NADPH] 1.
     
 0.865
Cbr1-2
Carbonyl reductase [NADPH] 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.865
CSKR_6968s
Glutathione S-transferase class-mu 28 kDa isozyme; Belongs to the GST superfamily.
     
 0.841
CLF_107328
Glutathione S-transferase class-mu 28 kDa isozyme.
     
 0.841
CLF_105838
Glutathione S-transferase class-mu 28 kDa isozyme; Belongs to the GST superfamily.
     
 0.841
Rttn
Rotatin.
     
 0.600
PXDN
Peroxidasin-like protein.
     
 0.600
CLF_107804
Leucine-rich repeat-containing protein 70.
     
 0.600
CLF_106117
SelT-like protein.
      
 0.560
CSKR_4169s
Glutathione S-transferase class-mu 28 kDa isozyme; Belongs to the GST superfamily.
     
 0.546
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.