STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZDHHC12Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (459 aa)    
Predicted Functional Partners:
Golga7
Golgin subfamily A member 7.
    
 0.648
CSKR_7338s
POT1PC domain-containing protein.
    
 0.644
RAD50
DNA repair protein RAD50.
    
 0.584
MRE11A
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
  0.554
DKC1
H/ACA ribonucleoprotein complex subunit 4.
    
 0.505
CSKR_7417s
Uncharacterized protein.
    
 0.457
H2AFY
Core histone macro-H2A.1.
   
 0.453
DNA2
DNA replication ATP-dependent helicase/nuclease DNA2.
    
  0.452
MIMI_L669
Collagen-like protein 7.
    
  0.449
RFC3
Replication factor C subunit 3.
     
 0.444
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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