STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rsph4aRadial spoke head protein 4-like protein A. (686 aa)    
Predicted Functional Partners:
RANBP2
E3 SUMO-protein ligase RanBP2.
   
 
 0.939
ran
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.829
CSKR_9118s
Uncharacterized protein.
    
 0.816
RSPH9
Radial spoke head protein 9-like protein.
   
 0.744
CSKR_3966s
Uncharacterized protein.
    
 0.639
NUP98
Nuclear pore complex protein Nup98-Nup96.
    
 0.637
CSKR_8031s
Uncharacterized protein.
    
 0.637
CSKR_10384s
Uncharacterized protein.
    
 0.637
NCOA5
Nuclear receptor coactivator 5.
    
 0.637
AP1M1
AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
   
 
 0.617
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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