STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSKR_1405sUncharacterized protein. (186 aa)    
Predicted Functional Partners:
Cog3
Conserved oligomeric Golgi complex subunit 3.
   
 0.971
Cog4
Conserved oligomeric Golgi complex subunit 4.
   
 0.957
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.951
Cog5
Conserved oligomeric Golgi complex subunit 5.
    
 0.947
COG8
Conserved oligomeric Golgi complex subunit 8.
    
 0.892
Vti1a
Vesicle transport through interaction with t-SNAREs-like protein 1A.
     
 0.738
STX5
Syntaxin-5; Belongs to the syntaxin family.
     
 0.733
STX16
Syntaxin-16; Belongs to the syntaxin family.
     
 0.730
Vps53
Vacuolar protein sorting-associated protein 53-like protein.
     
 0.728
scat
Vacuolar protein sorting-associated protein 54.
     
 0.724
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.