STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A20Mitochondrial carnitine/acylcarnitine carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (488 aa)    
Predicted Functional Partners:
PGM2
Phosphoglucomutase-2; Belongs to the phosphohexose mutase family.
    
 0.845
DIP2C
Disco-interacting protein 2-like protein C.
    
 0.791
SBSPON
Somatomedin-B and thrombospondin type-1 domain-containing protein.
    
 0.791
PGM3
Phosphoacetylglucosamine mutase; Catalyzes the conversion of GlcNAc-6-P into GlcNAc-1-P during the synthesis of uridine diphosphate/UDP-GlcNAc, a sugar nucleotide critical to multiple glycosylation pathways including protein N- and O- glycosylation; Belongs to the phosphohexose mutase family.
    
 0.776
CPT2
Carnitine O-palmitoyltransferase 2.
   
  
 0.763
CHAT
Choline O-acetyltransferase; Belongs to the carnitine/choline acetyltransferase family.
   
 
 0.744
Crat
Carnitine O-acetyltransferase; Belongs to the carnitine/choline acetyltransferase family.
   
 
 0.744
CLF_102229
UPF0568 protein C14orf166 homolog.
 
      0.722
gatA
Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the amidase family. GatA subfamily.
     
 0.711
AASDH
Acyl-CoA synthetase family member 4.
   
  
 0.648
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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