STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM13AProtein FAM13A. (643 aa)    
Predicted Functional Partners:
Rhou
Rho-related GTP-binding protein RhoU.
  
 
 0.588
Cdc42
Cell division control protein 42.
  
 
 0.578
Rac1
Ras-related C3 botulinum toxin substrate 1.
  
 
 0.557
Rho1
Ras-like GTP-binding protein Rho1.
    
 0.484
rhoaa
Rho-related GTP-binding protein RhoA-A.
    
 0.484
Rho1-2
Ras-like GTP-binding protein Rho1.
    
 0.484
rho-1
Ras-like GTP-binding protein rhoA.
    
 0.484
racF2
Rho-related protein racF2.
    
 0.465
Rhob
Rho-related GTP-binding protein RhoB.
    
 0.430
rhoA
GTP-binding protein rhoA.
    
 0.430
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.