STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chmp1aCharged multivesicular body protein 1a. (842 aa)    
Predicted Functional Partners:
chmp2a
Charged multivesicular body protein 2a.
   
0.903
chmp4b
Charged multivesicular body protein 4b.
    
 0.877
Chmp5
Charged multivesicular body protein 5.
   
 0.877
chmp3
Charged multivesicular body protein 3.
   
 0.856
katnal2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
    
 0.852
IST1
IST1-like protein.
    
 
 0.791
CHMP2B
Charged multivesicular body protein 2b.
   
0.755
VPS4B
Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.
   
 0.747
VPS4B-2
Vacuolar protein sorting-associated protein 4B.
   
 0.747
CHMP7
Charged multivesicular body protein 7.
    
0.656
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.