STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSXBrain-specific homeobox-like protein. (452 aa)    
Predicted Functional Partners:
EMX2
Homeobox protein EMX2.
   
 
0.815
CSKR_2905s
Uncharacterized protein.
   
 0.728
SALL4
Sal-like protein 4.
   
 0.728
Drosha
Ribonuclease 3.
     
 0.703
DDX21
Nucleolar RNA helicase 2.
    
  0.655
Ddx17
Putative ATP-dependent RNA helicase DDX17; Belongs to the DEAD box helicase family.
    
  0.655
Pou6f1
POU domain.
    
 0.627
vvl
POU domain protein.
    
 0.627
POU2F1
POU domain class 2 transcription factor 1.
    
 0.627
Pou6f1-2
Homeobox protein ceh-18.
    
 0.627
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.