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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YIPF1Protein YIPF1. (628 aa)    
Predicted Functional Partners:
yipf6
Protein YIPF.
   
 
 0.970
yipf5
Protein YIPF.
   
 
 0.906
maea
Macrophage erythroblast attacher.
   
  
 0.521
slc38a7
Putative sodium-coupled neutral amino acid transporter 7.
      
 0.480
yif1b-a
Protein YIF1B-A.
   
  
 0.458
YIF1B
Protein YIF1B.
   
  
 0.458
ZNF207
BUB3-interacting and GLEBS motif-containing protein.
      
0.424
Atp7a
Copper-transporting ATPase 1.
      
 0.412
sel-9
Suppressor/enhancer of lin-12 protein 9.
    
 
 0.403
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.