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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cog3Conserved oligomeric Golgi complex subunit 3. (1669 aa)    
Predicted Functional Partners:
Cog4
Conserved oligomeric Golgi complex subunit 4.
    
0.995
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.995
Cog5
Conserved oligomeric Golgi complex subunit 5.
   
 0.994
COG8
Conserved oligomeric Golgi complex subunit 8.
    
 0.994
Cog2
Conserved oligomeric Golgi complex subunit 2.
   
 0.993
CSKR_1405s
Uncharacterized protein.
   
 0.971
STX5
Syntaxin-5; Belongs to the syntaxin family.
    
0.891
Vti1a
Vesicle transport through interaction with t-SNAREs-like protein 1A.
   
 
 0.881
Vps53
Vacuolar protein sorting-associated protein 53-like protein.
   
 
0.855
scat
Vacuolar protein sorting-associated protein 54.
     
 0.850
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.