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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Glud1Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (533 aa)    
Predicted Functional Partners:
glt1
Putative glutamate synthase [NADPH].
  
 0.995
GOT1
Aspartate aminotransferase.
   
 0.979
GOT2
Aspartate aminotransferase.
   
 0.977
CSKR_5539s
Citrate synthase; Belongs to the citrate synthase family.
   
 0.977
IDH2
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
   
 0.974
Ogdh
2-oxoglutarate dehydrogenase.
   
 0.972
Aldh4a1
Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.970
fdxr
NADPH:adrenodoxin oxidoreductase, mitochondrial.
  
 0.969
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
    
 0.969
Dld
Dihydrolipoyl dehydrogenase.
  
 
 0.966
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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