close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF3C3General transcription factor 3C polypeptide 3. (1240 aa)    
Predicted Functional Partners:
Brf1
Transcription factor IIIB 90 kDa subunit.
    
 0.991
BDP1
Transcription factor TFIIIB component B''-like protein.
   
 0.971
CPSF3
Cleavage and polyadenylation specificity factor subunit 3.
   
   0.940
SYMPK
Symplekin.
   
   0.937
Cpsf1
Cleavage and polyadenylation specificity factor subunit 1.
    
   0.936
cpsf2
Cleavage and polyadenylation specificity factor subunit 2.
    
   0.936
POLR3A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.897
CSTF2
Cleavage stimulation factor subunit 2.
   
   0.889
CSKR_8906s
Uncharacterized protein.
    
 0.871
Gtf3c1
General transcription factor 3C polypeptide 1.
    
 0.871
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.