STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASCC2Activating signal cointegrator 1 complex subunit 2. (740 aa)    
Predicted Functional Partners:
Ascc3
Activating signal cointegrator 1 complex subunit 3.
    
 0.986
TRIP4
Activating signal cointegrator 1.
    
 
 0.966
Ascc1
Activating signal cointegrator 1 complex subunit 1.
    
 0.945
HFM1
Putative ATP-dependent DNA helicase HFM1.
    
 0.896
hfm1
Putative ATP-dependent DNA helicase HFM1.
    
 0.896
CSKR_11600s
AKAP7_NLS domain-containing protein.
    
 0.815
SNRNP200
U5 small nuclear ribonucleoprotein helicase.
    
 0.772
CSKR_11321s
Uncharacterized protein.
    
 
 0.623
Crnkl1
Crooked neck-like protein 1.
   
  
 0.543
Clbn
Nuclear export mediator factor NEMF-like protein.
      
 0.535
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.