STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DMXL1DmX-like protein 1. (3875 aa)    
Predicted Functional Partners:
VHA55
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
    
 
 0.943
Skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 
 0.921
Vha26
V-type proton ATPase subunit E.
    
 
 0.861
atp6v1c1a
V-type proton ATPase subunit C 1-A.
    
 
 0.771
Wdr7
WD repeat-containing protein 7.
   
 
 0.756
Atp6v0a1
V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.
    
 
 0.683
Vha68-2
V-type proton ATPase catalytic subunit A isoform 2.
    
 
 0.597
Rab3gap1
Rab3 GTPase-activating protein catalytic subunit.
   
 
 0.595
apitd1
Centromere protein S.
    
 
 0.485
vha-10
Putative V-type proton ATPase subunit G.
    
 
 0.485
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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