STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
romo1Reactive oxygen species modulator 1. (81 aa)    
Predicted Functional Partners:
TIMM21
Mitochondrial import inner membrane translocase subunit Tim21.
    
 
 0.747
timm23
Mitochondrial import inner membrane translocase subunit Tim23.
    
 
 0.731
CLF_105063
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7.
   
   0.718
Uqcrq
Cytochrome b-c1 complex subunit 8.
   
    0.685
blp
Mitochondrial import inner membrane translocase subunit Tim16.
   
  
 0.685
NDUFA13
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13.
   
    0.678
CSKR_14372s
Uncharacterized protein.
   
 
 0.668
timm50
Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
   
  
 0.653
CSKR_5799s
Uncharacterized protein.
   
    0.647
NDUFB8
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8.
   
  
 0.628
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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