STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppp1r16aProtein phosphatase 1 regulatory subunit 16A. (257 aa)    
Predicted Functional Partners:
CSKR_5509s
Uncharacterized protein.
    
 0.709
Ppp1ca
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.678
TOPP7
Serine/threonine-protein phosphatase.
   
 0.678
flw
Serine/threonine-protein phosphatase beta isoform.
   
 0.678
Ppp1ca-2
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.678
gsp-2
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.678
gsp-1
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.678
gsp-1-2
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.678
PPP1CA
Serine/threonine-protein phosphatase.
   
 0.678
TOPP4
Serine/threonine-protein phosphatase PP1 isozyme 4.
   
 0.678
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.