STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSKR_13560sUncharacterized protein. (146 aa)    
Predicted Functional Partners:
mib1-2
E3 ubiquitin-protein ligase mind-bomb.
   
 0.996
Birc6
Baculoviral IAP repeat-containing protein 6.
   
 0.992
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.991
FANCM
Fanconi anemia group M protein.
   
 0.981
Eci2
Enoyl-CoA delta isomerase 2.
    
 0.967
hsdl2
Hydroxysteroid dehydrogenase-like protein 2.
    
 0.966
RABGEF1
Rab5 GDP/GTP exchange factor.
    
 0.954
Rabgef1
Rab5 GDP/GTP exchange factor.
    
 0.954
RPS6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.944
RpL19
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.940
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.