STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSKR_14560sUncharacterized protein. (149 aa)    
Predicted Functional Partners:
Actr6
Actin-related protein 6; Belongs to the actin family.
   
 
 0.981
ruvbl1
RuvB-like helicase.
    
 
 0.972
VPS72
Vacuolar protein sorting-associated protein 72-like protein.
    
 
 0.972
ruvbl2
RuvB-like helicase; Belongs to the RuvB family.
    
 
 0.970
YEATS4
YEATS domain-containing protein 4.
   
 
 0.965
h2afv
Histone H2A; Belongs to the histone H2A family.
    
 
 0.962
DMAP1
DNA methyltransferase 1-associated protein 1.
    
 
 0.955
ACTL6A
Actin-like protein 6A; Belongs to the actin family.
    
 
 0.950
CCDC170
Coiled-coil domain-containing protein.
    
 
 0.933
CCDC170-2
Coiled-coil domain-containing protein.
    
 
 0.933
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.