STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIGOGPI ethanolamine phosphate transferase 3. (998 aa)    
Predicted Functional Partners:
pigb
Mannosyltransferase.
    
 0.967
PIGT
Phosphatidylinositol glycan class T.
    
 0.964
CSKR_10079s
Uncharacterized protein.
    
 0.875
CSKR_14437s
Uncharacterized protein.
    
 0.875
Gpaa1
Glycosylphosphatidylinositol anchor attachment 1 protein.
    
 0.875
CSKR_10080s
Uncharacterized protein.
    
 0.875
PGRP-SB1
Peptidoglycan-recognition protein SB1.
   
 0.871
Pigv
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
   
 0.803
AK9
Adenylate kinase 9.
   
 
  0.742
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.738
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.