STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mig-15Serine/threonine-protein kinase mig-15. (625 aa)    
Predicted Functional Partners:
Map3k7
Mitogen-activated protein kinase kinase kinase 7.
  
 
 0.860
Map3k9
Mitogen-activated protein kinase kinase kinase 9.
   
0.776
MAP3K1
Mitogen-activated protein kinase kinase kinase 1.
    
0.727
Traf4
TNF receptor-associated factor 4.
    
 0.693
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
0.690
PDZRN4
PDZ domain-containing RING finger protein 4.
    
  0.659
Pdzrn3
E3 ubiquitin-protein ligase PDZRN3.
    
  0.659
CSKR_11093s
RING-type domain-containing protein.
    
  0.659
CLF_105360
TNF receptor-associated factor 4.
    
  0.659
MKL2
MKL/myocardin-like protein 2.
    
  0.658
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.