STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TtpalAlpha-tocopherol transfer protein-like. (274 aa)    
Predicted Functional Partners:
Sdr16c5
Epidermal retinol dehydrogenase 2.
    
  0.623
Ankfy1
Rabankyrin-5.
    
 0.581
AP1G1
AP-1 complex subunit gamma.
    
 0.547
SEC63
Translocation protein SEC63-like protein.
   
 
 0.537
Pld2
Phospholipase D2.
    
 
 0.521
AP1M1
AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
     
 0.479
Cltc
Clathrin heavy chain 1.
     
 0.476
Chc
Clathrin heavy chain.
     
 0.476
Ap3d1
AP-3 complex subunit delta-1.
    
 0.468
Gba2
Non-lysosomal glucosylceramidase.
    
 0.468
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.