STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gem-2GTP-binding protein GEM. (618 aa)    
Predicted Functional Partners:
Itsn1
Intersectin-1.
    
 0.964
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
  
 0.944
SHANK3-2
SH3 and multiple ankyrin repeat domains protein 3.
    
 0.932
NOS1AP
Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein.
    
 0.833
unc-89
Muscle M-line assembly protein unc-89.
   
 0.819
unc-89-2
Muscle M-line assembly protein unc-89.
   
 0.819
CSKR_11071s
Uncharacterized protein.
   
 0.819
trio
Triple functional domain protein.
   
 0.767
trio-2
Triple functional domain protein.
   
 0.767
CSKR_9411s
Kinesin-like calmodulin-binding-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.750
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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