Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COG6 | COG8 | A0A3R7H0D1 | A0A419PTQ9 | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | Conserved oligomeric Golgi complex subunit 8. | 0.996 |
COG6 | CSKR_387s | A0A3R7H0D1 | A0A3R7D483 | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | Ras-related protein ORAB-1. | 0.807 |
COG6 | Cog3 | A0A3R7H0D1 | A0A419PL20 | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | Conserved oligomeric Golgi complex subunit 3. | 0.995 |
COG6 | GOSR1 | A0A3R7H0D1 | A0A3R7GTM5 | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | Golgi SNAP receptor complex member 1. | 0.892 |
COG6 | Golga5 | A0A3R7H0D1 | A0A419PX47 | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | Golgin subfamily A member 5. | 0.553 |
COG8 | COG6 | A0A419PTQ9 | A0A3R7H0D1 | Conserved oligomeric Golgi complex subunit 8. | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | 0.996 |
COG8 | CSKR_387s | A0A419PTQ9 | A0A3R7D483 | Conserved oligomeric Golgi complex subunit 8. | Ras-related protein ORAB-1. | 0.660 |
COG8 | Cog3 | A0A419PTQ9 | A0A419PL20 | Conserved oligomeric Golgi complex subunit 8. | Conserved oligomeric Golgi complex subunit 3. | 0.994 |
COG8 | GOSR1 | A0A419PTQ9 | A0A3R7GTM5 | Conserved oligomeric Golgi complex subunit 8. | Golgi SNAP receptor complex member 1. | 0.893 |
COG8 | Golga5 | A0A419PTQ9 | A0A419PX47 | Conserved oligomeric Golgi complex subunit 8. | Golgin subfamily A member 5. | 0.509 |
CSKR_387s | COG6 | A0A3R7D483 | A0A3R7H0D1 | Ras-related protein ORAB-1. | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | 0.807 |
CSKR_387s | COG8 | A0A3R7D483 | A0A419PTQ9 | Ras-related protein ORAB-1. | Conserved oligomeric Golgi complex subunit 8. | 0.660 |
CSKR_387s | Cog3 | A0A3R7D483 | A0A419PL20 | Ras-related protein ORAB-1. | Conserved oligomeric Golgi complex subunit 3. | 0.808 |
CSKR_387s | GORASP2 | A0A3R7D483 | H2KNT1 | Ras-related protein ORAB-1. | Golgi reassembly-stacking protein 2. | 0.892 |
CSKR_387s | GOSR1 | A0A3R7D483 | A0A3R7GTM5 | Ras-related protein ORAB-1. | Golgi SNAP receptor complex member 1. | 0.601 |
CSKR_387s | Golga5 | A0A3R7D483 | A0A419PX47 | Ras-related protein ORAB-1. | Golgin subfamily A member 5. | 0.521 |
CSKR_387s | TRIP11 | A0A3R7D483 | A0A3R7FXB0 | Ras-related protein ORAB-1. | Thyroid receptor-interacting protein 11. | 0.468 |
CSKR_387s | VPS33B | A0A3R7D483 | A0A3R7GT68 | Ras-related protein ORAB-1. | Vacuolar protein sorting-associated protein 33B; Belongs to the STXBP/unc-18/SEC1 family. | 0.906 |
CSKR_387s | Vps33a | A0A3R7D483 | A0A3R7EMR1 | Ras-related protein ORAB-1. | Vacuolar protein sorting-associated protein 33A; Belongs to the STXBP/unc-18/SEC1 family. | 0.902 |
Cog3 | COG6 | A0A419PL20 | A0A3R7H0D1 | Conserved oligomeric Golgi complex subunit 3. | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | 0.995 |
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