Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APPL2 | Ptk7 | A0A419PKS9 | A0A3R7EWR4 | DCC-interacting protein 13-beta. | Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.689 |
APPL2 | cdon | A0A419PKS9 | A0A419PZE0 | DCC-interacting protein 13-beta. | Cell adhesion related protein. | 0.968 |
CSKR_1603s | Ptk7 | A0A3R7CG45 | A0A3R7EWR4 | NTR domain-containing protein. | Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.495 |
CSKR_1603s | UNC5C | A0A3R7CG45 | A0A3R7CQB5 | NTR domain-containing protein. | Netrin receptor UNC5C. | 0.643 |
CSKR_1603s | Unc5a | A0A3R7CG45 | A0A419Q4G2 | NTR domain-containing protein. | Netrin receptor UNC5A. | 0.643 |
CSKR_1603s | cdon | A0A3R7CG45 | A0A419PZE0 | NTR domain-containing protein. | Cell adhesion related protein. | 0.774 |
NTN3 | Ptk7 | A0A3R7CBU6 | A0A3R7EWR4 | Netrin-3. | Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.495 |
NTN3 | UNC5C | A0A3R7CBU6 | A0A3R7CQB5 | Netrin-3. | Netrin receptor UNC5C. | 0.643 |
NTN3 | Unc5a | A0A3R7CBU6 | A0A419Q4G2 | Netrin-3. | Netrin receptor UNC5A. | 0.643 |
NTN3 | cdon | A0A3R7CBU6 | A0A419PZE0 | Netrin-3. | Cell adhesion related protein. | 0.774 |
Ptk2b | Ptk7 | A0A419Q554 | A0A3R7EWR4 | Protein-tyrosine kinase 2-beta. | Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.831 |
Ptk2b | cdon | A0A419Q554 | A0A419PZE0 | Protein-tyrosine kinase 2-beta. | Cell adhesion related protein. | 0.761 |
Ptk2b | trio | A0A419Q554 | A0A419PUT0 | Protein-tyrosine kinase 2-beta. | Triple functional domain protein. | 0.580 |
Ptk2b | trio-2 | A0A419Q554 | H2KSD1 | Protein-tyrosine kinase 2-beta. | Triple functional domain protein. | 0.580 |
Ptk7 | APPL2 | A0A3R7EWR4 | A0A419PKS9 | Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family. | DCC-interacting protein 13-beta. | 0.689 |
Ptk7 | CSKR_1603s | A0A3R7EWR4 | A0A3R7CG45 | Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family. | NTR domain-containing protein. | 0.495 |
Ptk7 | NTN3 | A0A3R7EWR4 | A0A3R7CBU6 | Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family. | Netrin-3. | 0.495 |
Ptk7 | Ptk2b | A0A3R7EWR4 | A0A419Q554 | Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family. | Protein-tyrosine kinase 2-beta. | 0.831 |
Ptk7 | UNC5C | A0A3R7EWR4 | A0A3R7CQB5 | Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family. | Netrin receptor UNC5C. | 0.699 |
Ptk7 | Unc5a | A0A3R7EWR4 | A0A419Q4G2 | Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family. | Netrin receptor UNC5A. | 0.699 |
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