STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC1A1-2Amino acid transporter. (361 aa)    
Predicted Functional Partners:
SLC13A3
Solute carrier family 13 member 3.
    
 0.679
SEC24C
Protein transport protein Sec24C.
      
 0.613
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.558
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.544
CSKR_2308s
PHB domain-containing protein.
    
 0.526
CSKR_5539s
Citrate synthase; Belongs to the citrate synthase family.
  
  
 0.450
Gls
Glutaminase kidney isoform.
   
 
 0.435
UPB1
Beta-ureidopropionase.
    
 0.429
ALDH3A2
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.415
Cndp2
Cytosolic non-specific dipeptidase.
    
  0.409
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.