STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSKR_9350sReverse transcriptase domain-containing protein. (518 aa)    
Predicted Functional Partners:
CSKR_6775s
Uncharacterized protein.
   
 
 0.687
Arl1
ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.665
CSKR_7781s
Uncharacterized protein.
   
 
 0.602
CSKR_7783s
Uncharacterized protein.
   
 
 0.602
CSKR_1469s
Uncharacterized protein.
  
     0.511
CSKR_3615s
Reverse transcriptase domain-containing protein.
  
     0.493
CSKR_8864s
Reverse transcriptase domain-containing protein.
  
     0.473
CSKR_2963s
Reverse transcriptase domain-containing protein.
  
     0.451
arl3
ADP-ribosylation factor-like protein 3.
     
 0.445
Rpt6
26S protease regulatory subunit 8; Belongs to the AAA ATPase family.
    
   0.435
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.