Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C1GalTA-2 | NELFB | A0A419Q1F2 | H2KPE6 | Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1. | Negative elongation factor B. | 0.774 |
C1GalTA-2 | NELFCD | A0A419Q1F2 | A0A3R7GUY3 | Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1. | Negative elongation factor D. | 0.773 |
C1GalTA-2 | POLR2C | A0A419Q1F2 | H2KPW0 | Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1. | DNA-directed RNA polymerase II subunit RPB3. | 0.708 |
C1GalTA-2 | POLR2J | A0A419Q1F2 | G7YEZ3 | Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1. | DNA-directed RNA polymerase II subunit RPB11-a. | 0.700 |
C1GalTA-2 | Polr2a | A0A419Q1F2 | A0A419Q500 | Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.710 |
C1GalTA-2 | Polr2h | A0A419Q1F2 | A0A419QAK5 | Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1. | DNA-directed RNA polymerases I. | 0.725 |
C1GalTA-2 | RpII15 | A0A419Q1F2 | A0A419PWI6 | Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.707 |
C1GalTA-2 | RpII18 | A0A419Q1F2 | H2KU25 | Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1. | DNA-directed RNA polymerases I II and III subunit RPABC2. | 0.695 |
C1GalTA-2 | Supt5h | A0A419Q1F2 | A0A3R7CFH2 | Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1. | Transcription elongation factor SPT5. | 0.730 |
C1GalTA-2 | rpb-5 | A0A419Q1F2 | H2KS42 | Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1. | DNA-directed RNA polymerases I II and III subunit RPABC1. | 0.701 |
NELFB | C1GalTA-2 | H2KPE6 | A0A419Q1F2 | Negative elongation factor B. | Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1. | 0.774 |
NELFB | NELFCD | H2KPE6 | A0A3R7GUY3 | Negative elongation factor B. | Negative elongation factor D. | 0.994 |
NELFB | POLR2C | H2KPE6 | H2KPW0 | Negative elongation factor B. | DNA-directed RNA polymerase II subunit RPB3. | 0.943 |
NELFB | POLR2J | H2KPE6 | G7YEZ3 | Negative elongation factor B. | DNA-directed RNA polymerase II subunit RPB11-a. | 0.901 |
NELFB | Polr2a | H2KPE6 | A0A419Q500 | Negative elongation factor B. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.911 |
NELFB | Polr2h | H2KPE6 | A0A419QAK5 | Negative elongation factor B. | DNA-directed RNA polymerases I. | 0.915 |
NELFB | RpII15 | H2KPE6 | A0A419PWI6 | Negative elongation factor B. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.955 |
NELFB | RpII18 | H2KPE6 | H2KU25 | Negative elongation factor B. | DNA-directed RNA polymerases I II and III subunit RPABC2. | 0.909 |
NELFB | Supt5h | H2KPE6 | A0A3R7CFH2 | Negative elongation factor B. | Transcription elongation factor SPT5. | 0.977 |
NELFB | rpb-5 | H2KPE6 | H2KS42 | Negative elongation factor B. | DNA-directed RNA polymerases I II and III subunit RPABC1. | 0.958 |
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