STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAFAH1B2Platelet-activating factor acetylhydrolase IB subunit beta. (230 aa)    
Predicted Functional Partners:
CSKR_13400s
Lissencephaly-1-like protein.
    
 0.993
TBC1D31
TBC1 domain family member 31.
    
 0.744
CSKR_12161s
1-acylglycerophosphocholine O-acyltransferase 1.
     
 0.694
SPAG16
Sperm-associated antigen 16 protein.
    
  0.554
CSKR_9868s
RING-type domain-containing protein.
   
 
 0.421
LIPE
Hormone-sensitive lipase.
   
  
 0.413
CHMP7
Charged multivesicular body protein 7.
    
   0.410
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.