NCL-2 protein (Clonorchis sinensis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

NCL-2

Nucleolin. (552 aa)

Predicted Functional Partners:

CLF_105665

0.813

Pan3

0.771

Cbp20

0.770

Pan2

0.768

EIF4G2

0.755

CSKR_4973s

0.755

EIF4G3

0.755

TIF1

0.753

inf-1

0.753

Ncbp1

0.752

Your Current Organism:

Clonorchis sinensis

NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLF_105665	CSKR_4973s	G7YDY1	A0A3R7D500	Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein.	0.939
CLF_105665	Cbp20	G7YDY1	G7YJT2	Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	Nuclear cap-binding protein subunit 2.	0.741
CLF_105665	EIF4G2	G7YDY1	A0A3R7C0K4	Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	Eukaryotic translation initiation factor 4 gamma 2.	0.995
CLF_105665	EIF4G3	G7YDY1	A0A419PIF9	Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	Eukaryotic translation initiation factor 4 gamma 3.	0.997
CLF_105665	NCL-2	G7YDY1	A0A419Q6L1	Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	Nucleolin.	0.813
CLF_105665	Ncbp1	G7YDY1	A0A419QI08	Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	Nuclear cap-binding protein subunit 1.	0.913
CLF_105665	Pan2	G7YDY1	H2KS93	Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	PAB-dependent poly(A)-specific ribonuclease subunit PAN2.	0.594
CLF_105665	Pan3	G7YDY1	A0A3R7FDA1	Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	PAB-dependent poly(A)-specific ribonuclease subunit PAN3.	0.642
CLF_105665	TIF1	G7YDY1	A0A3R7GQS4	Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	ATP-dependent RNA helicase eIF4A; Belongs to the DEAD box helicase family.	0.951
CLF_105665	inf-1	G7YDY1	A0A419QDH9	Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	Eukaryotic initiation factor 4A; Belongs to the DEAD box helicase family.	0.940
CSKR_4973s	CLF_105665	A0A3R7D500	G7YDY1	Uncharacterized protein.	Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	0.939
CSKR_4973s	Cbp20	A0A3R7D500	G7YJT2	Uncharacterized protein.	Nuclear cap-binding protein subunit 2.	0.844
CSKR_4973s	NCL-2	A0A3R7D500	A0A419Q6L1	Uncharacterized protein.	Nucleolin.	0.755
CSKR_4973s	Ncbp1	A0A3R7D500	A0A419QI08	Uncharacterized protein.	Nuclear cap-binding protein subunit 1.	0.865
CSKR_4973s	TIF1	A0A3R7D500	A0A3R7GQS4	Uncharacterized protein.	ATP-dependent RNA helicase eIF4A; Belongs to the DEAD box helicase family.	0.864
CSKR_4973s	inf-1	A0A3R7D500	A0A419QDH9	Uncharacterized protein.	Eukaryotic initiation factor 4A; Belongs to the DEAD box helicase family.	0.864
Cbp20	CLF_105665	G7YJT2	G7YDY1	Nuclear cap-binding protein subunit 2.	Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	0.741
Cbp20	CSKR_4973s	G7YJT2	A0A3R7D500	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.844
Cbp20	EIF4G2	G7YJT2	A0A3R7C0K4	Nuclear cap-binding protein subunit 2.	Eukaryotic translation initiation factor 4 gamma 2.	0.871
Cbp20	EIF4G3	G7YJT2	A0A419PIF9	Nuclear cap-binding protein subunit 2.	Eukaryotic translation initiation factor 4 gamma 3.	0.876