STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSKR_5357sUncharacterized protein. (1374 aa)    
Predicted Functional Partners:
cox12
Cytochrome c oxidase subunit 6B.
   
 0.806
BOLA3
BolA-like protein 3; Belongs to the BolA/IbaG family.
   
 0.802
CSKR_6942s
Glutamyl-tRNA(Gln) amidotransferase subunit C.
   
 0.801
CSKR_14372s
Uncharacterized protein.
   
 0.777
CSKR_12279s
Uncharacterized protein.
   
 0.777
CSKR_4127s
Uncharacterized protein.
   
 0.728
Uqcrq
Cytochrome b-c1 complex subunit 8.
   
 0.670
WBP2NL
Postacrosomal sheath WW domain-binding protein.
   
 0.649
PMPCB
Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.
    
 0.645
CYC1
Ubiquinol-cytochrome c reductase cytochrome c1 subunit.
   
 0.638
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.