STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSKR_2158sUncharacterized protein. (401 aa)    
Predicted Functional Partners:
egl-9
Hypoxia-inducible factor prolyl hydroxylase.
    
 0.908
Tceb1
Transcription elongation factor B polypeptide 1.
    
 0.798
tgo
Aryl hydrocarbon receptor nuclear translocator-like protein.
    
 0.796
Pol-26
LINE-1 retrotransposable element ORF2 protein.
    
 0.796
Cul2
Cullin-2; Belongs to the cullin family.
    
0.750
KDM8
Lysine-specific demethylase 8.
    
 0.746
Crebbp
CREB-binding protein.
    
 0.723
EP300
Histone acetyltransferase.
    
 0.723
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.665
CSKR_2172s
Uncharacterized protein.
    
  0.643
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.