STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A1CFAPOBEC1 complementation factor. (855 aa)    
Predicted Functional Partners:
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.805
Eprs
Bifunctional glutamate/proline--tRNA ligase.
   
 
 0.764
Hnrnph2
Heterogeneous nuclear ribonucleoprotein H2.
   
 0.746
CSKR_1875s
RanBP2-type domain-containing protein.
   
 0.745
RPS6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
   0.739
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
   
 0.733
HNRNPK-2
Heterogeneous nuclear ribonucleoprotein K.
   
 0.727
Tra2b
Transformer-2-like protein beta.
   
 0.711
Cbp20
Nuclear cap-binding protein subunit 2.
    
  0.677
CSKR_13432s
Y-box factor-like protein.
   
 0.661
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.