STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSKR_12665sUncharacterized protein. (1272 aa)    
Predicted Functional Partners:
FTSJ1
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
   
 
 0.979
FTSJ3
Pre-rRNA processing protein FTSJ3.
   
 
 0.912
Utp15
U3 small nucleolar RNA-associated protein 15-like protein.
   
    0.893
NOP56
Nucleolar protein 56.
   
    0.868
ASF1
Histone chaperone ASF1.
   
    0.839
Smc1a
Structural maintenance of chromosomes protein.
   
    0.712
K07C5.4
Putative NOP5 family protein K07C5.4.
   
    0.684
WDR36
WD repeat-containing protein 36.
   
    0.681
TRMT11
tRNA (Guanine(10)-N2)-methyltransferase-like protein.
   
 
 0.681
CSKR_11292s
Uncharacterized protein.
   
 
  0.669
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.