STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ell-2RNA polymerase II elongation factor ELL. (165 aa)    
Predicted Functional Partners:
Eaf1
ELL-associated factor 1.
    
 0.923
MLLT1
Protein ENL.
    
 0.870
CCNT2
Cyclin-T2; Belongs to the cyclin family.
    
 0.841
POLR2C
DNA-directed RNA polymerase II subunit RPB3.
    
 0.837
CSKR_1028s
TFIIS N-terminal domain-containing protein.
   
 0.820
cdk9
Cyclin-dependent kinase 9; Belongs to the protein kinase superfamily.
    
 0.802
CDK9
Cyclin-dependent kinase 9.
    
 0.802
Supt5h
Transcription elongation factor SPT5.
    
 0.791
RpII15
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.785
EloA
Transcription elongation factor B polypeptide 3.
     
 0.767
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.