Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AG8 | COG6 | A0A419QFQ4 | A0A3R7H0D1 | Severin. | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | 0.735 |
AG8 | COG8 | A0A419QFQ4 | A0A419PTQ9 | Severin. | Conserved oligomeric Golgi complex subunit 8. | 0.743 |
AG8 | CSKR_158s | A0A419QFQ4 | A0A3R7CX76 | Severin. | Uncharacterized protein. | 0.641 |
AG8 | Cask | A0A419QFQ4 | A0A419PZV3 | Severin. | Peripheral plasma membrane protein CASK. | 0.702 |
AG8 | Cog3 | A0A419QFQ4 | A0A419PL20 | Severin. | Conserved oligomeric Golgi complex subunit 3. | 0.719 |
AG8 | Cog4 | A0A419QFQ4 | A0A3R7G8F8 | Severin. | Conserved oligomeric Golgi complex subunit 4. | 0.698 |
AG8 | SVIL | A0A419QFQ4 | A0A3R7FGD2 | Severin. | Supervillin. | 0.637 |
AG8 | TWF2 | A0A419QFQ4 | A0A419PTD2 | Severin. | Twinfilin-2. | 0.694 |
AG8 | Wasl | A0A419QFQ4 | A0A419QD93 | Severin. | Neural Wiskott-Aldrich syndrome protein. | 0.650 |
AG8 | lrk-1 | A0A419QFQ4 | A0A3R7DIY7 | Severin. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.615 |
COG6 | AG8 | A0A3R7H0D1 | A0A419QFQ4 | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | Severin. | 0.735 |
COG6 | COG8 | A0A3R7H0D1 | A0A419PTQ9 | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | Conserved oligomeric Golgi complex subunit 8. | 0.996 |
COG6 | Cog3 | A0A3R7H0D1 | A0A419PL20 | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | Conserved oligomeric Golgi complex subunit 3. | 0.995 |
COG6 | Cog4 | A0A3R7H0D1 | A0A3R7G8F8 | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | Conserved oligomeric Golgi complex subunit 4. | 0.994 |
COG8 | AG8 | A0A419PTQ9 | A0A419QFQ4 | Conserved oligomeric Golgi complex subunit 8. | Severin. | 0.743 |
COG8 | COG6 | A0A419PTQ9 | A0A3R7H0D1 | Conserved oligomeric Golgi complex subunit 8. | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | 0.996 |
COG8 | Cog3 | A0A419PTQ9 | A0A419PL20 | Conserved oligomeric Golgi complex subunit 8. | Conserved oligomeric Golgi complex subunit 3. | 0.994 |
COG8 | Cog4 | A0A419PTQ9 | A0A3R7G8F8 | Conserved oligomeric Golgi complex subunit 8. | Conserved oligomeric Golgi complex subunit 4. | 0.995 |
CSKR_158s | AG8 | A0A3R7CX76 | A0A419QFQ4 | Uncharacterized protein. | Severin. | 0.641 |
CSKR_158s | lrk-1 | A0A3R7CX76 | A0A3R7DIY7 | Uncharacterized protein. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.986 |
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