Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atg12 | Atg5 | G7YBS2 | A0A419PU71 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Autophagy protein 5; Involved in autophagic vesicle formation. | 0.999 |
Atg12 | Gabarapl2 | G7YBS2 | A0A3R7FT17 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Gamma-aminobutyric acid receptor-associated protein-like 2. | 0.901 |
Atg12 | PIK3R4 | G7YBS2 | A0A3R7FDM2 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Phosphoinositide 3-kinase regulatory subunit 4. | 0.896 |
Atg12 | RB1CC1 | G7YBS2 | A0A419PBW4 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | RB1-inducible coiled-coil protein 1. | 0.769 |
Atg12 | Ulk3 | G7YBS2 | A0A3R7EYJ1 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Serine/threonine-protein kinase ULK3. | 0.937 |
Atg12 | WIPI2 | G7YBS2 | A0A419Q4J6 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | WD repeat domain phosphoinositide-interacting protein 2. | 0.966 |
Atg12 | atg16 | G7YBS2 | A0A419QH05 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Autophagy-related protein 16. | 0.998 |
Atg12 | atg3 | G7YBS2 | H2KSG8 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Autophagy-related protein 3. | 0.999 |
Atg12 | pik3c3 | G7YBS2 | A0A3R7FBT7 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Phosphatidylinositol 3-kinase catalytic subunit type 3. | 0.900 |
Atg12 | unc-51 | G7YBS2 | A0A3R7CXH0 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Serine/threonine-protein kinase unc-51. | 0.975 |
Atg5 | Atg12 | A0A419PU71 | G7YBS2 | Autophagy protein 5; Involved in autophagic vesicle formation. | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | 0.999 |
Atg5 | Gabarapl2 | A0A419PU71 | A0A3R7FT17 | Autophagy protein 5; Involved in autophagic vesicle formation. | Gamma-aminobutyric acid receptor-associated protein-like 2. | 0.889 |
Atg5 | PIK3R4 | A0A419PU71 | A0A3R7FDM2 | Autophagy protein 5; Involved in autophagic vesicle formation. | Phosphoinositide 3-kinase regulatory subunit 4. | 0.879 |
Atg5 | RB1CC1 | A0A419PU71 | A0A419PBW4 | Autophagy protein 5; Involved in autophagic vesicle formation. | RB1-inducible coiled-coil protein 1. | 0.795 |
Atg5 | Ulk3 | A0A419PU71 | A0A3R7EYJ1 | Autophagy protein 5; Involved in autophagic vesicle formation. | Serine/threonine-protein kinase ULK3. | 0.937 |
Atg5 | WIPI2 | A0A419PU71 | A0A419Q4J6 | Autophagy protein 5; Involved in autophagic vesicle formation. | WD repeat domain phosphoinositide-interacting protein 2. | 0.969 |
Atg5 | atg16 | A0A419PU71 | A0A419QH05 | Autophagy protein 5; Involved in autophagic vesicle formation. | Autophagy-related protein 16. | 0.999 |
Atg5 | atg3 | A0A419PU71 | H2KSG8 | Autophagy protein 5; Involved in autophagic vesicle formation. | Autophagy-related protein 3. | 0.998 |
Atg5 | pik3c3 | A0A419PU71 | A0A3R7FBT7 | Autophagy protein 5; Involved in autophagic vesicle formation. | Phosphatidylinositol 3-kinase catalytic subunit type 3. | 0.891 |
Atg5 | unc-51 | A0A419PU71 | A0A3R7CXH0 | Autophagy protein 5; Involved in autophagic vesicle formation. | Serine/threonine-protein kinase unc-51. | 0.975 |
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