STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc35a3UDP-N-acetylglucosamine transporter. (332 aa)    
Predicted Functional Partners:
HIAT1
Hippocampus abundant transcript 1 protein.
 
 
  
 0.871
hfm1
Putative ATP-dependent DNA helicase HFM1.
 
      0.679
PEPD
Xaa-Pro dipeptidase.
    
 0.413
Pepd
Xaa-Pro dipeptidase.
    
 0.413
Xpnpep3
Putative Xaa-Pro aminopeptidase 3.
    
 0.413
XPNPEP1
Xaa-Pro aminopeptidase 1; Belongs to the peptidase M24B family.
    
 0.413
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.