Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CSKR_1531s | CSKR_387s | A0A3R7CYD6 | A0A3R7D483 | Sec2p domain-containing protein. | Ras-related protein ORAB-1. | 0.411 |
CSKR_1531s | EXOC1 | A0A3R7CYD6 | A0A419PT54 | Sec2p domain-containing protein. | Exocyst complex component 1. | 0.832 |
CSKR_1531s | EXOC4 | A0A3R7CYD6 | A0A3R7G861 | Sec2p domain-containing protein. | Exocyst complex component 4. | 0.855 |
CSKR_1531s | Exoc2 | A0A3R7CYD6 | A0A419PTG1 | Sec2p domain-containing protein. | Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. | 0.832 |
CSKR_1531s | Exoc3 | A0A3R7CYD6 | A0A3R7DA37 | Sec2p domain-containing protein. | Exocyst complex component 3. | 0.836 |
CSKR_1531s | Exoc6b | A0A3R7CYD6 | A0A3R7C869 | Sec2p domain-containing protein. | Exocyst complex component 6B. | 0.877 |
CSKR_1531s | GDI1 | A0A3R7CYD6 | A0A3R7GRZ9 | Sec2p domain-containing protein. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.691 |
CSKR_1531s | Gdi1 | A0A3R7CYD6 | A0A3R7G8T9 | Sec2p domain-containing protein. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.691 |
CSKR_1531s | RASEF-2 | A0A3R7CYD6 | G7YAP1 | Sec2p domain-containing protein. | Ras and EF-hand domain-containing protein. | 0.791 |
CSKR_1531s | Rep | A0A3R7CYD6 | A0A3R7FR00 | Sec2p domain-containing protein. | Rab proteins geranylgeranyltransferase component A. | 0.566 |
CSKR_387s | CSKR_1531s | A0A3R7D483 | A0A3R7CYD6 | Ras-related protein ORAB-1. | Sec2p domain-containing protein. | 0.411 |
CSKR_387s | EXOC4 | A0A3R7D483 | A0A3R7G861 | Ras-related protein ORAB-1. | Exocyst complex component 4. | 0.470 |
CSKR_387s | Exoc3 | A0A3R7D483 | A0A3R7DA37 | Ras-related protein ORAB-1. | Exocyst complex component 3. | 0.483 |
CSKR_387s | Exoc6b | A0A3R7D483 | A0A3R7C869 | Ras-related protein ORAB-1. | Exocyst complex component 6B. | 0.436 |
CSKR_387s | GDI1 | A0A3R7D483 | A0A3R7GRZ9 | Ras-related protein ORAB-1. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.970 |
CSKR_387s | Gdi1 | A0A3R7D483 | A0A3R7G8T9 | Ras-related protein ORAB-1. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.970 |
CSKR_387s | RASEF-2 | A0A3R7D483 | G7YAP1 | Ras-related protein ORAB-1. | Ras and EF-hand domain-containing protein. | 0.708 |
CSKR_387s | Rep | A0A3R7D483 | A0A3R7FR00 | Ras-related protein ORAB-1. | Rab proteins geranylgeranyltransferase component A. | 0.816 |
EXOC1 | CSKR_1531s | A0A419PT54 | A0A3R7CYD6 | Exocyst complex component 1. | Sec2p domain-containing protein. | 0.832 |
EXOC1 | EXOC4 | A0A419PT54 | A0A3R7G861 | Exocyst complex component 1. | Exocyst complex component 4. | 0.998 |
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