STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc25a38bSolute carrier family 25 member 38-B; Belongs to the mitochondrial carrier (TC 2.A.29) family. (291 aa)    
Predicted Functional Partners:
PPOX
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
      
 0.562
Uros
Uroporphyrinogen-III synthase.
   
  
 0.562
slc25a26
S-adenosylmethionine mitochondrial carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 
 0.560
glrx5
Glutaredoxin-related protein 5.
      
 0.546
ALAS1
5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
      
 0.536
CLPX
ATP-dependent Clp protease ATP-binding subunit clpX-like.
    
 
 0.529
Abcb6
ATP-binding cassette sub-family B member 6.
      
 0.523
ABCB7
ATP-binding cassette subfamily B (MDR/TAP) member 7.
      
 0.512
SFXN1
Sidoreflexin.
      
 0.422
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
      
 0.408
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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