STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POU2F1POU domain class 2 transcription factor 1. (360 aa)    
Predicted Functional Partners:
BSX
Brain-specific homeobox-like protein.
    
 0.627
CSKR_2905s
Uncharacterized protein.
    
 0.598
SALL4
Sal-like protein 4.
    
 0.598
gtf2b
Transcription initiation factor IIB.
    
  0.577
GTF2E1
General transcription factor IIE subunit 1.
    
  0.570
SNAPC3
snRNA-activating protein complex subunit 3.
   
 
  0.542
PCF11
Pre-mRNA cleavage complex 2 protein Pcf11.
     
 0.534
SPAG16
Sperm-associated antigen 16 protein.
    
  0.526
TAF5
Transcription initiation factor TFIID subunit 5.
    
  0.526
TAF9
Transcription initiation factor TFIID subunit 9.
     
 0.524
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.