STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tm2d3TM2 domain-containing protein 3. (263 aa)    
Predicted Functional Partners:
POLK
DNA polymerase kappa.
 
      0.865
PIGA
Phosphatidylinositol N-acetylglucosaminyltransferase subunit A.
     
 0.744
Pigl
N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase.
     
 0.646
CSKR_2189s
Uncharacterized protein.
     
 0.646
PIGP
Phosphatidylinositol N-acetylglucosaminyltransferase subunit P.
   
 
 0.645
CORO6
Coronin; Belongs to the WD repeat coronin family.
 
      0.634
CSKR_689s
Uncharacterized protein.
      
 0.535
Lamtor2
Ragulator complex protein LAMTOR2.
      
 0.523
Nprl2
Nitrogen permease regulator 2-like protein.
   
  
 0.518
Mcee
Methylmalonyl-CoA epimerase.
      
 0.512
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.