STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
obgGTPase Obg. (478 aa)    
Predicted Functional Partners:
RPL12
60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.910
MRPL21
39S ribosomal protein L21.
  
 
 0.887
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
  
 
 0.883
CSKR_529s
Uncharacterized protein.
   
 
 0.874
mrpl-19
Putative 39S ribosomal protein L19.
  
 
 0.834
mtg1
Mitochondrial ribosome-associated GTPase 1.
   
 
 0.809
mrpl22
39S ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.778
MRPL12
39S ribosomal protein L12.
  
 
 0.747
Tufm
Elongation factor Tu.
   
 
 0.739
ict1
Peptidyl-tRNA hydrolase ICT1.
  
 
 0.738
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.