Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADL57852.1Predicted tRNA-ribosyltransferase. (305 aa)    
Predicted Functional Partners:
tgt
tRNA-guanine transglycosylase; Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs; Belongs to the archaeosine tRNA-ribosyltransferase family.
 
  
0.874
ADL57932.1
Predicted Fe-S oxidoreductase.
 
     0.848
rpl40e
50S ribosomal protein L40E; Belongs to the eukaryotic ribosomal protein eL40 family.
  
     0.721
ADL58584.1
Conserved hypothetical protein; Belongs to the UPF0179 family.
  
     0.702
ADL57853.1
Glutamate synthase, alpha subunit related protein; Belongs to the glutamate synthase family.
       0.660
ADL57842.1
Predicted regulatory protein.
 
     0.646
ADL58814.1
Conserved hypothetical protein.
  
     0.644
ADL57946.1
NMD3-related protein; Involved in nonsense-mediated mRNA decay.
  
     0.632
ADL57851.1
Conserved hypothetical protein.
       0.625
ADL59246.1
Predicted transcriptional regulator.
  
     0.607
Your Current Organism:
Methanothermobacter marburgensis
NCBI taxonomy Id: 79929
Other names: M. marburgensis str. Marburg, Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133), Methanobacterium thermoautotrophicum str. Marburg, Methanothermobacter marburgensis str. Marburg, Methanothermobacter marburgensis strain Marburg
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