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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL58036.1SelD-related protein. (328 aa)    
Predicted Functional Partners:
ADL58040.1
Methanogenesis marker protein 5.
 
     0.897
ADL58037.1
Peptidyl-prolyl cis-trans isomerase related protein; Belongs to the UPF0288 family.
 
     0.896
ADL58038.1
Methanogenesis marker protein 6.
 
     0.890
ADL58041.1
Predicted activator of 2-hydroxyglutaryl-CoA dehydratase.
 
     0.883
ADL58035.1
Conserved hypothetical protein.
 
     0.880
ADL58039.1
Conserved hypothetical protein.
 
     0.858
ADL58042.1
Methanogenesis marker protein 17.
 
     0.856
vapC
Predicted nucleic acid-binding protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
     0.763
ADL58081.1
SelA-related protein.
     
 0.736
nifB
Archaeal nitrogenase iron-molybdenum cofactor biosynthesis protein NifB; Radical SAM protein.
       0.692
Your Current Organism:
Methanothermobacter marburgensis
NCBI taxonomy Id: 79929
Other names: M. marburgensis str. Marburg, Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133), Methanobacterium thermoautotrophicum str. Marburg, Methanothermobacter marburgensis str. Marburg, Methanothermobacter marburgensis strain Marburg
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