Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ADL58975.1 | csl4 | MTBMA_c13880 | MTBMA_c17040 | Predicted RNA-binding protein. | Predicted RNA-binding protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | 0.977 |
| ADL58975.1 | ksgA | MTBMA_c13880 | MTBMA_c17120 | Predicted RNA-binding protein. | Predicted dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily. | 0.740 |
| ADL58975.1 | nop56 | MTBMA_c13880 | MTBMA_c15990 | Predicted RNA-binding protein. | Predicted ribosome biogenesis protein Nop56. | 0.988 |
| ADL58975.1 | rpr41 | MTBMA_c13880 | MTBMA_c10690 | Predicted RNA-binding protein. | Predicted exosome RNA binding protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Contributes to the structuring of the Rrp41 active site. | 0.967 |
| ADL58975.1 | rpr42 | MTBMA_c13880 | MTBMA_c10700 | Predicted RNA-binding protein. | Predicted exosome RNA binding protein; Catalytic component of the exosome, which is a complex involved in RNA degradation. Has 3'->5' exoribonuclease activity. Can also synthesize heteropolymeric RNA-tails. | 0.956 |
| ADL58975.1 | rpr43 | MTBMA_c13880 | MTBMA_c10710 | Predicted RNA-binding protein. | Predicted exosome RNA binding protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome. | 0.974 |
| ADL58975.1 | rps11p | MTBMA_c13880 | MTBMA_c05250 | Predicted RNA-binding protein. | 30S ribosomal protein S11; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | 0.998 |
| ADL58975.1 | rps4p | MTBMA_c13880 | MTBMA_c05240 | Predicted RNA-binding protein. | 30S ribosomal protein S4p; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.998 |
| ADL58975.1 | rps6e | MTBMA_c13880 | MTBMA_c07100 | Predicted RNA-binding protein. | 30S ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.999 |
| ADL58975.1 | rtcA | MTBMA_c13880 | MTBMA_c04860 | Predicted RNA-binding protein. | Predicted RNA 3'-terminal phosphate cyclase. | 0.974 |
| csl4 | ADL58975.1 | MTBMA_c17040 | MTBMA_c13880 | Predicted RNA-binding protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | Predicted RNA-binding protein. | 0.977 |
| csl4 | ksgA | MTBMA_c17040 | MTBMA_c17120 | Predicted RNA-binding protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | Predicted dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily. | 0.906 |
| csl4 | nop56 | MTBMA_c17040 | MTBMA_c15990 | Predicted RNA-binding protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | Predicted ribosome biogenesis protein Nop56. | 0.966 |
| csl4 | rpr41 | MTBMA_c17040 | MTBMA_c10690 | Predicted RNA-binding protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | Predicted exosome RNA binding protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Contributes to the structuring of the Rrp41 active site. | 0.999 |
| csl4 | rpr42 | MTBMA_c17040 | MTBMA_c10700 | Predicted RNA-binding protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | Predicted exosome RNA binding protein; Catalytic component of the exosome, which is a complex involved in RNA degradation. Has 3'->5' exoribonuclease activity. Can also synthesize heteropolymeric RNA-tails. | 0.999 |
| csl4 | rpr43 | MTBMA_c17040 | MTBMA_c10710 | Predicted RNA-binding protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | Predicted exosome RNA binding protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome. | 0.999 |
| csl4 | rps11p | MTBMA_c17040 | MTBMA_c05250 | Predicted RNA-binding protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | 30S ribosomal protein S11; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | 0.944 |
| csl4 | rps4p | MTBMA_c17040 | MTBMA_c05240 | Predicted RNA-binding protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | 30S ribosomal protein S4p; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.959 |
| csl4 | rps6e | MTBMA_c17040 | MTBMA_c07100 | Predicted RNA-binding protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | 30S ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.944 |
| csl4 | rtcA | MTBMA_c17040 | MTBMA_c04860 | Predicted RNA-binding protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | Predicted RNA 3'-terminal phosphate cyclase. | 0.973 |
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