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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL58608.1Conserved hypothetical protein. (531 aa)    
Predicted Functional Partners:
ADL58609.1
Conserved hypothetical protein.
     0.993
ADL58610.1
Conserved hypothetical protein.
 
     0.847
galE2
UDP-glucose 4-epimerase.
       0.719
ADL58709.1
Predicted pseudomurein-binding protein.
  
     0.642
ADL59166.1
Predicted pseudomurein-binding protein.
  
     0.640
ADL58448.1
Conserved hypothetical protein.
  
     0.561
ADL58074.1
Conserved hypothetical protein.
      
 0.546
ADL58233.1
Conserved hypothetical protein.
 
     0.537
ADL58566.1
Conserved hypothetical protein.
 
     0.528
argS
arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.520
Your Current Organism:
Methanothermobacter marburgensis
NCBI taxonomy Id: 79929
Other names: M. marburgensis str. Marburg, Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133), Methanobacterium thermoautotrophicum str. Marburg, Methanothermobacter marburgensis str. Marburg, Methanothermobacter marburgensis strain Marburg
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