Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADL58616.1Conserved hypothetical protein. (138 aa)    
Predicted Functional Partners:
sfsA
Predicted DNA-binding protein; Belongs to the SfsA family.
     0.757
ADL58536.1
Predicted geranylgeranylglyceryl phosphate synthase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). This reaction is the first ether-bond-formation step in the biosynthesis of archaeal membrane lipids. Cannot use sn-glycerol-3-phosphate (G3P) or dihydroxyacetonephosphate (DHAP) as substrate. Belongs to the GGGP/HepGP synthase family. Group II subfamily.
       0.617
ADL59233.1
Predicted Zn-dependent hydrolase.
       0.570
ADL58040.1
Methanogenesis marker protein 5.
       0.540
ADL58041.1
Predicted activator of 2-hydroxyglutaryl-CoA dehydratase.
       0.540
ADL58042.1
Methanogenesis marker protein 17.
       0.538
mtrC2
Methyl coenzyme M reductase II, operon protein C.
       0.538
ADL58037.1
Peptidyl-prolyl cis-trans isomerase related protein; Belongs to the UPF0288 family.
       0.438
Your Current Organism:
Methanothermobacter marburgensis
NCBI taxonomy Id: 79929
Other names: M. marburgensis str. Marburg, Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133), Methanobacterium thermoautotrophicum str. Marburg, Methanothermobacter marburgensis str. Marburg, Methanothermobacter marburgensis strain Marburg
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