STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vorA22-oxoisovalerate oxidoreductase, subunit alpha. (381 aa)    
Predicted Functional Partners:
vorB
2-oxoisovalerate oxidoreductase, subunit beta.
 
 0.999
vorA1
2-oxoisovalerate oxidoreductase, subunit alpha.
  
  0.999
vorC
2-oxoisovalerate oxidoreductase, subunit gamma.
 
 
 0.994
ilvE
Predicted branched-chain-amino-acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
    
 0.911
porB2
Predicted pyruvate flavodoxin/ferredoxin oxidoreductase, subunit beta.
 
 
 0.902
korB
2-oxoglutarate synthase, subunit beta.
 
 
0.886
acs
acyl-CoA synthetase; AMP-forming.
 
  
 0.883
porB1
Pyruvate synthase, subunit B.
  
 
 0.876
korA
2-oxoglutarate synthase, subunit alpha.
 
 
 0.872
ADL58682.1
Predicted transcriptional regulator.
 
  
 0.850
Your Current Organism:
Methanothermobacter marburgensis
NCBI taxonomy Id: 79929
Other names: M. marburgensis str. Marburg, Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133), Methanobacterium thermoautotrophicum str. Marburg, Methanothermobacter marburgensis str. Marburg, Methanothermobacter marburgensis strain Marburg
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