STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copBPredicted copper-transporting P-type ATPase. (645 aa)    
Predicted Functional Partners:
ADL58741.1
Conserved hypothetical protein.
       0.792
rbr
Rubrerythrin.
  
  
 0.660
rbo
Superoxide reductase.
  
    0.618
ADL57727.1
Predicted cation transport ATPase.
 
   
0.583
ADL58740.1
Conserved hypothetical protein.
       0.553
ADL58739.1
Predicted metal-dependent hydrolase.
  
  
 0.511
ADL58745.1
Predicted glyoxalase family protein.
     
 0.464
ADL58058.1
Predicted transporter protein.
 
 
 0.439
gap
Glyceraldehyde 3-phosphate dehydrogenase.
 
  
 0.419
ADL59060.1
Predicted hydrolase.
 
  
 0.401
Your Current Organism:
Methanothermobacter marburgensis
NCBI taxonomy Id: 79929
Other names: M. marburgensis str. Marburg, Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133), Methanobacterium thermoautotrophicum str. Marburg, Methanothermobacter marburgensis str. Marburg, Methanothermobacter marburgensis strain Marburg
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.