STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL59068.1Ferredoxin. (61 aa)    
Predicted Functional Partners:
tfrA
Thiol:fumarate reductase, subunit A; Catalyzes the reduction of fumarate with reduced coenzyme M (CoM-S-H) and coenzyme B (CoB-S-H). In vitro, is able to reduces fumarate with reduced benzyl viologen, oxidize CoM-S-H and CoB-S-H to CoM-S-S-CoB with methylene blue, and reduce CoM-S-S-CoB with reduced benzyl viologen. The enzyme has specificity for the two thiol compounds as the CoB--CoM heterodisulfide reductase. The enzyme is very sensitive to oxygen; Belongs to the FAD-dependent oxidoreductase 2 family.
  
 
 0.833
ADL57743.1
Predicted NADH dehydrogenase.
   
 
 0.778
pycB
Pyruvate carboxylase, subunit B.
     
 0.606
ADL58149.1
Predicted glutamate synthase, large subunit; Belongs to the glutamate synthase family.
  
  
 0.563
tfrB
Thiol:fumarate reductase, subunit B; Catalyzes the reduction of fumarate with reduced coenzyme M (CoM-S-H) and coenzyme B (CoB-S-H). In vitro, is able to reduces fumarate with reduced benzyl viologen, oxidize CoM-S-H and CoB-S-H to CoM-S-S-CoB with methylene blue, and reduce CoM-S-S-CoB with reduced benzyl viologen. The enzyme has specificity for the two thiol compounds as the CoB--CoM heterodisulfide reductase. The enzyme is very sensitive to oxygen.
  
  
 0.560
ADL57664.1
Predicted transporter protein.
  
  
 0.556
ADL58467.1
Predicted ABC-type transporter protein, ATPase component.
  
  
 0.542
ADL58896.1
Predicted ABC-type transporter, ATPase component.
  
  
 0.542
mvhA
F420-non-reducing hydrogenase, subunit A; Part of a complex that provides reducing equivalents for heterodisulfide reductase.
  
  
 0.495
frhA
F420-reducing hydrogenase, subunit alpha; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
  
  
 0.495
Your Current Organism:
Methanothermobacter marburgensis
NCBI taxonomy Id: 79929
Other names: M. marburgensis str. Marburg, Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133), Methanobacterium thermoautotrophicum str. Marburg, Methanothermobacter marburgensis str. Marburg, Methanothermobacter marburgensis strain Marburg
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